PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190344.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 260aa    MW: 29464.2 Da    PI: 5.533
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190344.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.8e-10901311155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +RR++iN+ ++ L +llP++   + +K + a+iL  A++Y+k+L+
  XP_019190344.1  90 NRRQQINDNLSYLHSLLPES---YIQKGDEASILGGAINYVKELE 131
                     8*******************...9******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MELEAMALYK VPQVSWSGCD FVANNNQFPL EFQCPNFPEF EACSYYPPPH HHHQWLPNSP  60
PADHVVVAEE EDEVAGPTRQ LHRRSNAQTN RRQQINDNLS YLHSLLPESY IQKGDEASIL  120
GGAINYVKEL EEELQLLCAK NSTANLLQDA NIGASDGCRG YELSTPCGDH IQVTMGGENH  180
NNVELKLHSK WRPKLLPRFI SQIETLMLTV LHFNLSRTDQ FLLCSLSLKV EDGSKFTSVK  240
RIATVANRIL ARIQEEDERV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.12e-32bHLH family protein