PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190518.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 165aa    MW: 18642.6 Da    PI: 6.7958
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190518.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.3e-31103161159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYG+K+vk+s++pr+YY+C+  gC+vkk+ver+++dp++v++tYeg Hnh+
  XP_019190518.1 103 LDDGYKWRKYGKKMVKNSPNPRNYYKCSVDGCQVKKRVERDKDDPSYVITTYEGIHNHQ 161
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MDGNYYQNMG SSPFGSPHHP VFEPSEYLDL GDWAGEEEEP AAMHVSGGHY YPLLNPPHHQ  60
APPPPEGVHG YLQGGPRNNG GSYGGREMRE KFAFKTKSEV EILDDGYKWR KYGKKMVKNS  120
PNPRNYYKCS VDGCQVKKRV ERDKDDPSYV ITTYEGIHNH QGPLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.11e-42WRKY family protein