PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190695.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 311aa    MW: 35360.4 Da    PI: 7.4078
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.1e-19164214255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+ +g   r++lg+f+ta eAaka+++a+ +++g
  XP_019190695.1 164 RYRGVRQRP-WGKYAAEIRDPKRRG--CRVWLGTFDTAIEAAKAYDRAAFRMRG 214
                     7********.**********96554..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MASFDEVSTL EHIRNYLLGD QYSPREFNFE SRLSHSCSSS GSSCSAVEVS SSQSEFLMDS  60
LSFQENFFEF QPQNQSNMVV RESQSSFSSS CSSSMNDNKF SNFESHPQIV DLTPLRTQNS  120
NACKERKPSL KIDLSPAVKK IEWIDFSGSS MTVQPPEKEE EKRRYRGVRQ RPWGKYAAEI  180
RDPKRRGCRV WLGTFDTAIE AAKAYDRAAF RMRGSKAILN FPLQVSTYKL EQAYAAEDGG  240
RKRRRDAREE ETTSTAVVKK EKSEERPLTP SSWNTISDWD WDQSVNGMFN LPPLSPLSPH  300
PALGYPQLAV I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1241245RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.14e-48ERF family protein