PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190712.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family C2H2
Protein Properties Length: 214aa    MW: 23589.2 Da    PI: 6.8669
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.0001578100123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C + F++   L  H+++H
  XP_019190712.1  78 YPCTFCRREFRSAQALGGHMNVH 100
                     99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MAAHLGLASL SHSQLQNFAQ SHHIPAPPSP PPDSASTVGY WMWNPRNTAA EEEEEDDSWE  60
IKAFEEDTSN ATWPPRSYPC TFCRREFRSA QALGGHMNVH RRERARLQLP TTTSAGLCRL  120
LYSLPPNPNG GAAFSPAYTK PSANSSPRLL SVSPFTTNSF PATPPCRITS PLHPSVSDDN  180
TNIKNYRFGT QRREPAIVEE LDLELRLGCS SSSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17810.13e-30C2H2 family protein