PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190741.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 279aa    MW: 31010.2 Da    PI: 7.4346
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190741.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.38.9e-19154205256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +l+g+
  XP_019190741.1 154 RYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAAVAYDRAAFRLRGA 205
                     8********.***********9987..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MNLKPYKYPI HPFRLSTSTL SVFLLLLLLL CLLFTSPLKV LKMMFGDNNA DFALLESIQR  60
YLLDDFDAPV LGLGENWGEW TVPSPAEYNS PDSGDFSGSS GWLSWVDEEE TPSPVVKKEP  120
ETMGFHEFPA ILDFTAVPPP KVEVSPAPPL VEKRYRGVRR RPWGKFAAEI RDPAKNGARV  180
WLGTYETAED AAVAYDRAAF RLRGARALLN FPLRINSGEP EPVRITTKKR LAASTDYCSS  240
TSSSSSSTSS ENVSCKRRKT AAQVVEQSVV QSSTSFHLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.12e-28ERF family protein