PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190826.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 239aa    MW: 26257.4 Da    PI: 5.4546
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.31e-19125175255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  XP_019190826.1 125 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDKAAYRMRG 175
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MMYEDTEFMF DSAFLDSIQR FYFLDDFHTP AETQQDFCRS SSSGRSSFPC LGENWGESTV  60
PGDNSSGWMP AVAATAAATS VVKDEPEMGF NGIPGIWDFT AASPPEVEAA EPAAAAAPQE  120
VMQKHYRGVR RRPWGKFAAE IRDPAKNGAR VWLGTYETAE DAALAYDKAA YRMRGSRALL  180
NFPLRINSGE PEPVRITAKK RLPSPENCSP SSSVTCEDGC PKRRKKLSKA TEPGRVISN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1221227PKRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.15e-38ERF family protein