PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019190953.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

bZIP

Protein Properties

Length: 423aa MW: 45409.3 Da PI: 7.3903

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019190953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	64.3	2.2e-20	279	341	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e kre+rkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN Lk+e+++l+++++klk e+ XP_019190953.1 279 EREQKREKRKQSNRESARRSRLRKQAETEELAKRVQSLTSENINLKSEINKLTENSEKLKLEN 341 7999********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 423 aa Download sequence
MENSEEGKSS KPEKSSSSTP DQGNAQMYLD WAAIQAYYGP RLAIPPYFNS AVPPGHAPHP 60 YMWGPPQPMM PPPYGAPYAA IYAHGGVYAH PGVPIGSHSH GHEISPSAAI NEATAAASMG 120 TDTSGKSSGN ADRGLMSKLK GFDGLGMSIG NGNSDGGKGG ADHTHSQSME TEGSSDGSNA 180 DTVGENTKKR SRETTPTNAD KTTNGYPTSA GEFNGASKKL TPMTIPPNLP GQVMGTVVSP 240 NMTTSLDLRS PPSANLKASP TNVPQLSPQM ATETWAQNER EQKREKRKQS NRESARRSRL 300 RKQAETEELA KRVQSLTSEN INLKSEINKL TENSEKLKLE NAALMERLKA EKLGQMEEIS 360 LGKIDEKKRL QPVATADLLA RVNNSDCVDR NGEEGEVYDS NNSRTKLHQL LDASPRTDAV 420 AAR

Sequence ? help Back to Top

Protein Sequence Length: 423 aa Download sequence

MENSEEGKSS KPEKSSSSTP DQGNAQMYLD WAAIQAYYGP RLAIPPYFNS AVPPGHAPHP  60
YMWGPPQPMM PPPYGAPYAA IYAHGGVYAH PGVPIGSHSH GHEISPSAAI NEATAAASMG  120
TDTSGKSSGN ADRGLMSKLK GFDGLGMSIG NGNSDGGKGG ADHTHSQSME TEGSSDGSNA  180
DTVGENTKKR SRETTPTNAD KTTNGYPTSA GEFNGASKKL TPMTIPPNLP GQVMGTVVSP  240
NMTTSLDLRS PPSANLKASP TNVPQLSPQM ATETWAQNER EQKREKRKQS NRESARRSRL  300
RKQAETEELA KRVQSLTSEN INLKSEINKL TENSEKLKLE NAALMERLKA EKLGQMEEIS  360
LGKIDEKKRL QPVATADLLA RVNNSDCVDR NGEEGEVYDS NNSRTKLHQL LDASPRTDAV  420
AAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	296	302	RRSRLRK
2	296	303	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	5e-76	bZIP family protein