PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019190997.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 293aa    MW: 32224 Da    PI: 5.2852
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019190997.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42e-19107156255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp    +r +r++lg+f taeeAa  ++ a+ +l+g
  XP_019190997.1 107 KFRGVRQRP-WGKWAAEIRDP----IRkTRIWLGTFNTAEEAAYVYDTAAIELRG 156
                     89*******.**********7....246*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDGNGNPVKY RVEKTVTLKQ FKGGVCDNMP RVVRISVTDD DATDSSGDEG GGFRRIMKKH  60
VSEVRLERGG LVEDRNGNRY KKVKTGGKKV AQVGEDQQKG GSGSGRKFRG VRQRPWGKWA  120
AEIRDPIRKT RIWLGTFNTA EEAAYVYDTA AIELRGPDAM TNFLTPPLPP PRSAVSDYDS  180
TGESEVLPVP SPTSVLRTHT ATTAAAEKQN GNENKQCGVE PPTTENGDGV LTTNCCVETE  240
QCCLNGVLDF WSSSSLLTDY YHYGDEKILP EVKMEGSLDD ISLDFQACTW DMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-38ERF family protein