PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191191.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 104aa    MW: 12312.8 Da    PI: 7.779
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191191.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.34.6e-104078444
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                     ++++E++l+++ +k  G + W++Ia +++ gRt++++  +w
   XP_019191191.1 40 MSQQEEDLIYRMHKIVGDR-WALIAGRIP-GRTAEEIERFW 78
                     799**************99.*********.*********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MSKEQQQQHL QKKRSKMSSN NQSCSNTEEV SSMEWEFINM SQQEEDLIYR MHKIVGDRWA  60
LIAGRIPGRT AEEIERFWIM KHSDAFAHKR HPTSPTTHQI DQIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.14e-35MYB_related family protein