PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191252.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 220aa    MW: 24766.5 Da    PI: 4.6557
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1883133255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  XP_019191252.1  83 PYRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFSMRG 133
                     69*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MDSSSSSSFY VQNSDFSFEP PECFQWDYRS FDASLPFNVN DSEEMLLFGV LAEAAQENSE  60
TNSSETIVKE EEVSSEETKK EKPYRGVRRR PWGKFAAEIR DSTRNGIRVW LGTFDSAEAA  120
ALAYDQAAFS MRGSAAILNF PVDTVRESLR ELRCTVEEGC SPVMALKKKH SIRKKSCKKS  180
CNNREIKVEN LLVFEDLGAE YLEQLLSSST SSISSSTNPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-52ERF family protein