PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191292.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 134aa    MW: 15388.9 Da    PI: 7.5081
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-191465256
             AP2  2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +g+++AeIrd       + +r++lg+f taeeAa+a+++a+ +++g+
  XP_019191292.1 14 KYRGVRKRP-WGKFAAEIRD----SarQGARVWLGTFNTAEEAARAYDRAAYAMRGH 65
                    8********.**********....33334**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MRDNNERESG GEIKYRGVRK RPWGKFAAEI RDSARQGARV WLGTFNTAEE AARAYDRAAY  60
AMRGHLAILN FPEEYNLPRT SSHFYSASAS ASASSSSSSS RQEREVLEFE YLDDKLLEEL  120
LDCDKEDNRK KRKD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129134RKKRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.14e-26ERF family protein