PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191293.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 135aa    MW: 15040.8 Da    PI: 8.884
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-202172256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdp+ +g  +r +lg+++t+e+Aa+a+++a+ kl+ +
  XP_019191293.1 21 KYRGVRRRP-WGKYAAEIRDPTRQG--ARQWLGTYDTPEDAARAYDRAAFKLRAH 72
                    8********.**********96544..*************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MEGSSSKGKA IQGGKGKEEV KYRGVRRRPW GKYAAEIRDP TRQGARQWLG TYDTPEDAAR  60
AYDRAAFKLR AHLAILNFPN EYYSQLPNPP CYYPSVTRAG GGPEKASGPS TGKPKEVFEI  120
EYEDGLLERL LDGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-37ERF family protein