PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191360.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family HB-other
Protein Properties Length: 110aa    MW: 12277.7 Da    PI: 6.7948
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.51.6e-0671109341
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-H CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLte 41 
                     k+++++++q++ Le+ Fe ++ +  e+  +LAk lgL+ 
  XP_019191360.1  71 KKRRLSPDQVHFLEQSFEVENMLEPERNVKLAKDLGLQP 109
                     56689********************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MLLATSPVNS TVHRLRVCRR LPAPPPHSLT DERYSSSSAS ASSMVNFNDG GEMERGGNED  60
YGGGGFYQAE KKRRLSPDQV HFLEQSFEVE NMLEPERNVK LAKDLGLQPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.13e-14HD-ZIP family protein