PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191569.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 258aa    MW: 28215.6 Da    PI: 6.602
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.5e-1459105354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+E+rRRdriN  +++Lr+l+Pk+     +K++Ka+ L  +v+++k+L
  XP_019191569.1  59 KSHSEAEKRRRDRINAQLATLRKLIPKS-----EKMDKAALLSSVVDHVKDL 105
                     79*************************8.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MENSFSGEWP EKGHGGGSAS FPWSFPSDYS SAAAAAAFLS WPAQPFEEAA DDRALSASKS  60
HSEAEKRRRD RINAQLATLR KLIPKSEKMD KAALLSSVVD HVKDLKRKAT EITEALVDVP  120
TDTDEVTIDD QHSTTAGAAI NDDQASTSSS PYLKASVCCD DRPELFAEIN RALKDLRLTT  180
VQADVTSLGG RVKSVFVLQL CSDDMDAAGE TSNDHMMMNS VKHSLKVALC KIAIPASTTS  240
YRIKSKRQRF FLPAHYHH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1244249KSKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.13e-50bHLH family protein