PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191672.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 260aa    MW: 29692 Da    PI: 6.7745
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY62.76.6e-20107165259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg +WrKYGqK++ +s++pr Y+rCt++   gC+++k+v+r +ed+   +++Y g+H+++
  XP_019191672.1 107 EDGGAWRKYGQKQILNSKYPRCYFRCTHKhsqGCKATKQVQRISEDE--YKTMYFGHHTCK 165
                     7999************************98999***********665..789*******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MAKPTMENPL HTHRKRVISV LHKGKKSATQ LQTLLRNFSL GSQEESRRLF PELTEQIMGS  60
FSEAVSQLLQ AADSAVSGEN PAKARRGCYN RSRKCSDTWI NVSNTKEDGG AWRKYGQKQI  120
LNSKYPRCYF RCTHKHSQGC KATKQVQRIS EDEYKTMYFG HHTCKDSFRA PVLAIESISN  180
DPFPMTTADS TYSPSFECIT QEGSGGGDHS YNDGIVNQED HQEFKDEYCM TSDNFDEDES  240
CFANLDNLFQ SEEMRRLLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-29WRKY family protein