PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019191732.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WOX

Protein Properties

Length: 166aa MW: 18843.9 Da PI: 7.0297

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019191732.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.1	8.2e-20	24	85	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq++ L +lF r+p+++++++++++l +++ ++V++WFqN++a+e++ XP_019191732.1 24 KCGRWNPTTEQVKLLTDLFSAgLRTPTTDQIQKISSELsfygKIESKNVFYWFQNHKARERQ 85 568***************99************************************97 PP
2	Wus_type_Homeobox	112.1	3e-36	24	87	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l+++GlrtP++++iq+i++eL+ yGkie+kNVfyWFQN+kaRerqk+ XP_019191732.1 24 KCGRWNPTTEQVKLLTDLFSAGLRTPTTDQIQKISSELSFYGKIESKNVFYWFQNHKARERQKR 87 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MAGGVYACAP PRVGRRSGGG RGTKCGRWNP TTEQVKLLTD LFSAGLRTPT TDQIQKISSE 60 LSFYGKIESK NVFYWFQNHK ARERQKRRRK VSVDDDDDDD DDDSRHEENV GSGERVVETL 120 QLFPLNSIDE LRFCGNTNAA FHYCSSNNIG TQMDHHPMLD LRLSFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	4e-52	WOX family protein