PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191757.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 230aa    MW: 24732.2 Da    PI: 4.6123
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191757.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82e-1655101151
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                     s y GVr +  +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+ 
  XP_019191757.1  55 SSYVGVRMRA-WGKWVSEIREPKK---KSRIWLGTFATAEMAARAHDVAAV 101
                     679****998.**********854...6*******************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAEASYSGTE LTGSSNNNSS CTALLSPAAT QTSTPNSHRK RRREDGNNDN GVASSSYVGV  60
RMRAWGKWVS EIREPKKKSR IWLGTFATAE MAARAHDVAA VAVKGDAANL NFPELAGLLP  120
RPASCSPQDV RAAAIKAARM DHLLSRDPEP ASSSSSSSSI ITAAETAASP SQDELGEIVE  180
LPELAADTSY DFVFPDWDGW DPWPCSGEYY GEIVFDTLLS GDFGNFLWQH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13943RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32800.12e-30ERF family protein