PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191789.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 225aa    MW: 24844 Da    PI: 8.2279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191789.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19554154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                    ++++GVr+++ +g+Wv+eIr+p        +r++lg+f+tae+Aa+a+++a+  + 
  XP_019191789.1  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFDTAEQAARAYDQAAILMS 54
                    59*******9.**********8.....334*********************98776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFDTAE QAARAYDQAA ILMSGRNAKT  60
NFPIAHDSEG EPITKTEPNN QKEAIIPSSS SSSSSSSSKA LSEILHAKLR RCSKVPTPSL  120
TCLRLDTENS HIGVWQKRAG QSSDSKWVMT IELQKKNSGG GGGNGERVEG MDCSSKKPPE  180
MVDGGRGGMD EEERLALQMI EELLQINTPI CPSFDGQVEE NSFCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.11e-57ERF family protein