PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191810.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 228aa    MW: 24280.1 Da    PI: 5.8691
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.46.2e-1758105355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+rw+  +g+Wv+eIr+p++   + r++lg++ t+e+Aa+a++ a+++l+g
  XP_019191810.1  58 YRGIRWR--NGKWVSEIREPKK---TSRIWLGTYLTPEMAAAAYDVAALALKG 105
                     9*****7..5*********854...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MADPFNYYNN KNVNVPPNPT PSLQIPDPLS HHTATATAFQ DQPSPSGGRG SPRRHHLYRG  60
IRWRNGKWVS EIREPKKTSR IWLGTYLTPE MAAAAYDVAA LALKGPDAPL NFPDSVVSYP  120
VPSSHAAADI AAAAARAAAS RAPAAPSSTG HGGSSSSELA AGASSTVVPK KEEEEFVDEE  180
ALFDMPNLMV DMAGGMMVSP PRMKPLSPPH GDDDSPDYCA ADTLWSYP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.15e-21ERF family protein