PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191812.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 259aa    MW: 28377.8 Da    PI: 4.5079
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191812.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.9e-1981131155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  XP_019191812.1  81 PVYRGVRRRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 131
                     68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDMDIVGNYY SGNFLSAVAA ASSFWSPEMG GAVSSPLSSS DTGSCSSAAM KANFSDEEVL  60
LASNNPKKRA GRKKFRETRH PVYRGVRRRN SGKWVCEVRE PNKKSRIWLG TFPTAEMAAR  120
AHDVAAIALR GRSACLNFAD SAWRLPIPAS ADPKDIQKAA AEAAEAFRPV AAANQNERII  180
IVEAEEEEEE ECNSSRQEEQ VTTTTENVFF MDEDALFDMP GLLADMAEAL MLPPPQCAVV  240
DRTNDVELDA DVSLWSYSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.15e-70ERF family protein