PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019191842.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 249aa    MW: 27158.8 Da    PI: 4.6079
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019191842.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.2e-1890139355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr ++ +g+++AeIrd  ++ ++ r++lg+f+taeeAa  +++a+ +l+g
  XP_019191842.1  90 YRGVRKRP-WGKYAAEIRDS-TR-RSVRVWLGTFDTAEEAALVYDQAAFALHG 139
                     9*******.**********3.22.25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MDFSFSQSNF QNLQPPYHLP FNENDAGDML LYTVLAEAGA AAAAANSSSS SSSMSGAFLG  60
GGGPATSMEE EEEEEEEWSS TRTSAGGVAY RGVRKRPWGK YAAEIRDSTR RSVRVWLGTF  120
DTAEEAALVY DQAAFALHGS TAVLNFPAEV VYQSLVELGC GFEDGGSPVL ALKRRHCKNT  180
RRSSVMNKKS NNNNNNNNNN NNNALKKKKK DGGEEDEFER VHGEVLVLED LGAEYLEQLL  240
SLSEAKLDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-45ERF family protein