PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192076.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 257aa    MW: 27879.5 Da    PI: 6.0467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192076.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.4e-20117167255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+ +++g
  XP_019192076.1 117 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAAIAYDKAAYRMRG 167
                     7********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MYQPVPAELP PVNFPVYHRS SSFSSLMSCL TETWGDLPLK VDDSEDMVIY GVLHDAVSDG  60
WTPFNFTAGE VKAEPWELIE EAAVTPACVA AVAPTFLAAP VETAAAPAPA VRPKGRHYRG  120
VRQRPWGKFA AEIRDPAKNG ARVWLGTYET AEEAAIAYDK AAYRMRGSKA LLNFPHRIGS  180
NEPDPVRVTA KRRSPEPEAL STSSASESGS PKRRRKVAAA EQAADSDVES RSNPLPAECH  240
ANILPIGEQL IVSQLAF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211217PKRRRKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.13e-45ERF family protein