PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192388.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 114aa    MW: 12529.4 Da    PI: 8.5006
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192388.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.71.4e-0515541155
                    HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    rR +++ +++  L++l+ +      +K + a++L++A+  Ik Lq
  XP_019192388.1 15 RRSQKLTDKITALQKLVSPY-----GKTDTASVLQEACISIKALQ 54
                    8999**************99.....9*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MDKLKGFCKW QVPARRSQKL TDKITALQKL VSPYGKTDTA SVLQEACISI KALQDQIQNL  60
CIASHGHSDQ KTRDENEAGL RNKGLCLVPV SLSQTVADQD LFSQMLASMS CFSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.18e-20bHLH family protein