PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192675.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 251aa    MW: 28417 Da    PI: 8.9446
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192675.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.51.2e-16166215355
             AP2   3 ykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrdp   + k  r++lg+++ + +Aa+a++ a+ k++g
  XP_019192675.1 166 YRGVRRRP-WGKYAAEIRDP---NrKGYRIWLGTYDNEVDAARAYDCAAFKMRG 215
                     9*******.**********9...6466**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MHEGMMMGTQ DEGITLELIR QHLLGDFATS TATTAEAFID NLNFCFPDNN VFTNQQTVTE  60
FSTEFVPLQF SVTDQDFFSG TNFFSVKFEF SNSDLYQPDL PSVGYFNPQP DFPQFYETKP  120
GIFLDPQTPP APNPIATEHV SSIPGGRREY GAGLTRVNRA GKGRYYRGVR RRPWGKYAAE  180
IRDPNRKGYR IWLGTYDNEV DAARAYDCAA FKMRGSKAIL NFPMDAGKSL PPAKVNRKRR  240
KESKSKMALK D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1237242RKRRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.11e-31ERF family protein