PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019192948.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 236aa    MW: 26376.3 Da    PI: 5.7661
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019192948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.8e-1181128454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRd iN++f eL ++l +    + +K +K++iL  Av+ + sL
  XP_019192948.1  81 SKACREKMRRDLINERFLELSSILEPT---RPPKTDKIAILSGAVRVVTSL 128
                     5678**********************9...99*************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
METDSNWLID YEMMDDISSA VSATASFPSS ATIDFSWVSQ TVNYSSTATG STACQFEDTE  60
VCKEAGSRKR LKLETCIPSG SKACREKMRR DLINERFLEL SSILEPTRPP KTDKIAILSG  120
AVRVVTSLRT EIEKLKESNL ELVEKIHELK AEKMELRDEK QKLKEDKMKL EQQVNGAAMF  180
AKPASFSHPI LNLEGQVAAG KKMMPVVGYP GFAMWQFMQP TIVDTSQDHV LHPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-70bHLH family protein