PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019193067.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

G2-like

Protein Properties

Length: 235aa MW: 26900.8 Da PI: 7.1092

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019193067.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.8	3.3e-30	21	74	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prl+WtpeLH +Fv+ave+LGG kAtPk+i+++m vkgL ++hvkSHLQ+YR XP_019193067.1 21 PRLQWTPELHGHFVDAVEHLGGRYKATPKRIVQMMAVKGLKISHVKSHLQMYRN 74 8****************************************************5 PP
2	Myb_DNA-binding	45.1	2.3e-14	22	73	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+e++ +vdav+ lGg+ t+k+I ++m kg+ ++ks++q+y+ XP_019193067.1 22 RLQWTPELHGHFVDAVEHLGGRykaTPKRIVQMMAvKGLKISHVKSHLQMYR 73 789***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MMKSSGQRNN GVRQYKKSEL PRLQWTPELH GHFVDAVEHL GGRYKATPKR IVQMMAVKGL 60 KISHVKSHLQ MYRNMRERTT FDVFVAAESC NFRDGRLHSS TWAPQGHTFE RLLRQSFDES 120 EEENKLGCYF SGNNQRNESN PIGHHLFYQE SQGSLNCEMT TTKAEEDGGG PSDESFEQIP 180 QSAYNEDDRR QVSPVKDDRN SHSGAASTDT VDLRHLQSTK DSKINLDLSI SCLYW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	2e-26	G2-like family protein