PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019193156.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

WRKY

Protein Properties

Length: 736aa MW: 79175.2 Da PI: 5.2538

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019193156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.6	9.5e-32	298	355	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgy+WrKYGqK+vkgse+prsYY+Ct+++C++kkkvers d++++ei+Y+g Hnh+k XP_019193156.1 298 DDGYTWRKYGQKHVKGSEYPRSYYKCTHPKCTMKKKVERSP-DGQITEIVYKGAHNHPK 355 8**************************************.*************85 PP
2	WRKY	106.3	1.6e-33	511	569	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Cts+gCpv+k+ver+++d k v++tYeg+Hnh+ XP_019193156.1 511 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSPGCPVRKHVERASDDLKSVITTYEGKHNHD 569 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MQVSDREPPF NGNEDNNNDD ERRGDDDTVK VAREKIDCET NNNNSNSNNN NGAAGDSKPL 60 DKAVADRPRR PSIAERRAAK CGFKASSIRC MASDSSSTAA VAAPSPSSLR SSYFTISPGI 120 SPTALLDSPV MLPNSLGQQS PTTGTMQFPA AEDENFGFNL AGVIDHNSPD EMKSSIGESS 180 DPFPSTSANE TPQVSYSSQM QITPSIPFDF PMESLDCGVE VSGVDTNPNS NSNSNLMLQS 240 PVSGECINNN VNGESCSSYN NQEQELDHRR GAAAAPAAKS VANNNASAAA GGGASSSDDG 300 YTWRKYGQKH VKGSEYPRSY YKCTHPKCTM KKKVERSPDG QITEIVYKGA HNHPKQATSL 360 RRSPPSLGAE SCSSEMMGQG GGSCFRAQAP IWANIQHYGS MPERPTLASS SDLTAEICDP 420 LSSLTTRSAA AMSGFESAAT PEPSSTLASQ DCDDNEDAVT QGISNSQFGD DGESEPKRRR 480 KDGWSTEASL STRSIREPRV VLQIESEIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSP 540 GCPVRKHVER ASDDLKSVIT TYEGKHNHDV PPNKAAVVNY NSYSAAPGTT ASSAMARAPA 600 LGGVGVQDNH PSFPFERKPM IAGGGGDELL RPEMLNCYAG DFRFVPSSIY PLKFPPPPLQ 660 GRSSPLTAAA AAATYNYSRP PGLVLPEFPM PLLPMSLPPF HELTNLPPLA DFLHFNDPST 720 KEEHKENDPH TSLLYE

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MQVSDREPPF NGNEDNNNDD ERRGDDDTVK VAREKIDCET NNNNSNSNNN NGAAGDSKPL  60
DKAVADRPRR PSIAERRAAK CGFKASSIRC MASDSSSTAA VAAPSPSSLR SSYFTISPGI  120
SPTALLDSPV MLPNSLGQQS PTTGTMQFPA AEDENFGFNL AGVIDHNSPD EMKSSIGESS  180
DPFPSTSANE TPQVSYSSQM QITPSIPFDF PMESLDCGVE VSGVDTNPNS NSNSNLMLQS  240
PVSGECINNN VNGESCSSYN NQEQELDHRR GAAAAPAAKS VANNNASAAA GGGASSSDDG  300
YTWRKYGQKH VKGSEYPRSY YKCTHPKCTM KKKVERSPDG QITEIVYKGA HNHPKQATSL  360
RRSPPSLGAE SCSSEMMGQG GGSCFRAQAP IWANIQHYGS MPERPTLASS SDLTAEICDP  420
LSSLTTRSAA AMSGFESAAT PEPSSTLASQ DCDDNEDAVT QGISNSQFGD DGESEPKRRR  480
KDGWSTEASL STRSIREPRV VLQIESEIDI LDDGYRWRKY GQKVVKGNPN PRSYYKCTSP  540
GCPVRKHVER ASDDLKSVIT TYEGKHNHDV PPNKAAVVNY NSYSAAPGTT ASSAMARAPA  600
LGGVGVQDNH PSFPFERKPM IAGGGGDELL RPEMLNCYAG DFRFVPSSIY PLKFPPPPLQ  660
GRSSPLTAAA AAATYNYSRP PGLVLPEFPM PLLPMSLPPF HELTNLPPLA DFLHFNDPST  720
KEEHKENDPH TSLLYE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-78	WRKY family protein