PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193271.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YA
Protein Properties Length: 142aa    MW: 15886.4 Da    PI: 10.8928
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA92.64.7e-2946102158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     de +YVNaKQyq+Il+RRq Rakl++++ l ++ rkpylheSRh hAl+R+Rg+gGrF
  XP_019193271.1  46 DEHIYVNAKQYQAILRRRQCRAKLQAHNSL-SRLRKPYLHESRHIHALNRARGPGGRF 102
                     688*************************99.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MLLLPYLAYH HHQSAASCHN NNVPPWVLNM VATRLIPLPL DDLPQDEHIY VNAKQYQAIL  60
RRRQCRAKLQ AHNSLSRLRK PYLHESRHIH ALNRARGPGG RFLNVKKKVI SSQLSCRNAC  120
KLPTVKVSIA GVNSGETGSS GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.16e-27NF-YA family protein