PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193331.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family MYB_related
Protein Properties Length: 81aa    MW: 9020.91 Da    PI: 4.1313
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193331.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.22.6e-103174146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     ++ ++ +E+ l v+  ++ G + W++Ia +++ gR+++++  +w++
   XP_019193331.1 31 KLVFSVDEEALVVRMYNLVGER-WSLIAGRIP-GRSAEEIEKYWNS 74
                     5789******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MADLDNSSTC GEAEACVEIT EVEVTSQDSN KLVFSVDEEA LVVRMYNLVG ERWSLIAGRI  60
PGRSAEEIEK YWNSTHSTSH Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.11e-17MYB_related family protein