PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019193389.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 255aa MW: 28340.8 Da PI: 6.395

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019193389.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	125.9	3.3e-39	4	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lp GfrF Pt+eelv++yL++k++g + +++ vi+ v+iy++ P +Lp ++++++w++F++ +++ a+g ++nr t++gyWkatg+ XP_019193389.1 4 LPLGFRFYPTEEELVSFYLRRKLQGATsADIDLVIPVVNIYHHTPCHLPLvageLSRGDSEQWFYFIPGEENRARGGKPNRLTRDGYWKATGSPS 98 699********************995556556***********435633334666****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v+s+ +e +g k+t+vf++grap g++t+W m+ey++ XP_019193389.1 99 FVYSSMNEIIGEKRTMVFHTGRAPGGTRTQWKMNEYKA 136 **********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MENLPLGFRF YPTEEELVSF YLRRKLQGAT SADIDLVIPV VNIYHHTPCH LPLVAGELSR 60 GDSEQWFYFI PGEENRARGG KPNRLTRDGY WKATGSPSFV YSSMNEIIGE KRTMVFHTGR 120 APGGTRTQWK MNEYKAAAQV VGGEGGASAS SDAIADLKLC HEFSLCRLYK KSKCDRSFDR 180 RPPADMAATG AGGGAPPPPP PQHNHLPAAA LMERSSSSST TDDYATPPSA MEYQYYWDTC 240 APLWDWEDLN INNLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	8e-62	NAC family protein