PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193455.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 234aa    MW: 25585.9 Da    PI: 7.4167
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193455.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.15e-1178125454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL  ll +    + +K +K++iL  Av+ + +L
  XP_019193455.1  78 SKACREKLRRDRLNDKFMELGALLEPG---RPPKTDKSAILIDAVRVVTQL 125
                     5678**********************8...89**************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVSPENTNWL YDYGVEDITA PDANFSGLGT GFSWPVQPLN GSSTVSPELD GSFGDSDGAK  60
DTGSKKRPRA ESCTSTSSKA CREKLRRDRL NDKFMELGAL LEPGRPPKTD KSAILIDAVR  120
VVTQLRDEAQ KLKDSNSNLQ EKIKELKTEK NELRDEKQRL KAEKDKLEQQ LKTMNTQPAL  180
LSPAIPAAAF AAQGHTPGTK VVPVISYPGV AMWQFLPPAA VDTSQDHVLR PPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-109bHLH family protein