PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019193671.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

SBP

Protein Properties

Length: 201aa MW: 22258.7 Da PI: 7.7232

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019193671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.9	1.1e-41	74	150	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqve+C adl+ ak+yh+rhkvCevh+kap+vl++g+ qrfCqqCsrfhe+sefD++krsCrrrLa+hnerrrk++ XP_019193671.1 74 CCQVEKCGADLTFAKTYHKRHKVCEVHAKAPAVLLNGVDQRFCQQCSRFHEVSEFDDAKRSCRRRLAGHNERRRKAS 150 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MEAHNHGGRL ASTVKAKREV EGEEEDDEME EEEEENEDDD QCRHLRKKKM DVGLGKKVSS 60 PGGVAGGVTA AAACCQVEKC GADLTFAKTY HKRHKVCEVH AKAPAVLLNG VDQRFCQQCS 120 RFHEVSEFDD AKRSCRRRLA GHNERRRKAS SSSSSCENRG GESRRRVEAP LKQESKQCSR 180 GGSQLIISAA GTSSYDNFHI H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	9e-35	SBP family protein