PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193752.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 226aa    MW: 24648.6 Da    PI: 6.0362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193752.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.2e-174693152
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
                    + y+GVr ++ +g+Wv+eIr p++   + r++lg++ t+e+Aa+a++ a  +
  XP_019193752.1 46 PVYRGVRMRS-WGKWVSEIRQPRK---KSRIWLGTYPTPEMAARAHDVAVVA 93
                    68*****998.**********843...6*******************99765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MAEELLAAES CTNSSSSLGS SFQSMQEKKK RKKKTKKNKE SGNRHPVYRG VRMRSWGKWV  60
SEIRQPRKKS RIWLGTYPTP EMAARAHDVA VVAIKGDSTL LNFPHLVGSL PRPASASPAD  120
VQAAAAKAAA MEELNPLCSS SSAAASPTTT SAPSDDLGEI IELPNLDDEG SFDSSEPKPE  180
LAAFDRWVYP PWWLPDDDLC AHFLDEPAGG ETVNPPSFET LNWTAH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834KKKRKKK
22933KKRKK
32937KKRKKKTKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-39ERF family protein