PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019193824.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

NAC

Protein Properties

Length: 210aa MW: 24537.6 Da PI: 8.1618

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019193824.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	52.7	1.4e-16	8	142	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevl 93 p G+ F+Ptd el+ yL+ v+g+++ + i e d+y+ ePw++ + ++++k +y F++ ++++++++r r++ +g+Wka+ + k+++ XP_019193824.1 8 PDGYIFRPTDAELL-GYLALFVTGNPVLSTVPIMESDLYNGeEPWKIFQ--RSRDKVLYIFATLKRRSSSDSRYIRTVGdgKGTWKAQDRGKPIY 99 78**********.9******777455*99865963..4678999**************87656899******* PP NAM 94 sk...........kgelvglkktLvfykgrapkgektdWvmheyr 127 + +++l+g k++L + k ++ + + +m+ey XP_019193824.1 100 RYddddddddnqqSRQLIGYKRSLRYEKSGSK--HDRRFLMKEYY 142 98778777765554555******9854443..47889999996 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MERQEHIPDG YIFRPTDAEL LGYLALFVTG NPVLSTVPIM ESDLYNGEEP WKIFQRSRDK 60 VLYIFATLKR RSSSDSRYIR TVGDGKGTWK AQDRGKPIYR YDDDDDDDDN QQSRQLIGYK 120 RSLRYEKSGS KHDRRFLMKE YYFPSNIRAT LKRPLNDIVL CRIKRKQNNR EIMGFESESI 180 EARDIGDIIG ELATKSCSYS EVNSLLETSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62380.1	2e-11	NAC family protein