PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193841.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family NF-YB
Protein Properties Length: 189aa    MW: 20147.2 Da    PI: 6.1263
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.73e-5717112297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrkt+ngddllwa++tlGfedyveplk yl+++r++ege
  XP_019193841.1  17 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTVNGDDLLWAMTTLGFEDYVEPLKGYLQRFRDMEGE 111
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     +
  XP_019193841.1 112 R 112
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MADSDNESGG HRESSPREQD RFLPIANVSR IMKKALPANA KISKDAKETV QECVSEFISF  60
ITGEASDKCQ REKRKTVNGD DLLWAMTTLG FEDYVEPLKG YLQRFRDMEG ERTAMVGRQE  120
RESSSGGGGN GGYAGESGVY GMMMGQHHGH IYGSGAYNPM GGGGSGNPGS GYIGSGAPPA  180
ADRPSRLGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.15e-75NF-YB family protein