PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193989.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 210aa    MW: 23290.5 Da    PI: 4.1797
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-182172156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++y+GVr +k +g+Wv+e+r p++   r r++lg+f+++e+Aa+a +aa  +l+ge
  XP_019193989.1 21 CKYRGVRKRK-WGKWVSEVRLPNS---RERIWLGSFDSPEKAARAFDAALFCLRGE 72
                    79*****999.*******999833...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MVKPKRQTAE IKNEPDSSSS CKYRGVRKRK WGKWVSEVRL PNSRERIWLG SFDSPEKAAR  60
AFDAALFCLR GETANFNFPD NPPDIVNGRS LTREEIQIAA VRFANSAAPI ANSGQPGNSD  120
SSSLLNADAP SPSDGSGSDQ MCSEMTETSL DSDFLDLCSY IGMEDNVANY GIFPGFDDFS  180
GEYYYVSPDI DDFAENYDGF SSQDSFLWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-60ERF family protein