PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019193990.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 168aa    MW: 18279.6 Da    PI: 9.2121
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019193990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2667.7e-211766255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++kGVr +k +g+WvAe+r p++   r r++lg+++taeeAa+a++aa+++l+g
  XP_019193990.1 17 KFKGVRMRK-WGKWVAEVRQPNS---RDRIWLGSYDTAEEAARAYDAAALSLRG 66
                    79*****99.*******888732...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MVRPKAASAE RRNAGGKFKG VRMRKWGKWV AEVRQPNSRD RIWLGSYDTA EEAARAYDAA  60
ALSLRGQTAK LNFPDDPPRL QQGVSLTPAE IQVAASRHAR SNLAAETKQP AVENIFFPPS  120
VLPEVGGSSF CDQFSAEACY EDHHSGAAMA AIPNAALSLD SSRIVWNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-27ERF family protein