PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194110.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 225aa    MW: 23837.7 Da    PI: 9.9849
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194110.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.69.7e-212473255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  XP_019194110.1 24 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAARQFRG 73
                    69*******.**********8...557************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MAVKGVGVKD GSSSRHVTGV KEVHFRGVRK RPWGRYAAEI RDPGKKSRVW LGTFDTAEEA  60
ARAYDAAARQ FRGPKAKTNF PLPSENHSPS HSSTVESSGS EAGAHAPQAP RELDLTRRLG  120
VGGKVEVGSV NNGLPFAHKQ PAVAILPNGQ PVLLFDTVWR PGMVNQQQAY RFEPVAVLPK  180
CAAGGGGGAH SDSDSSSVVD ESHFDGGLAK KGLNLDLNLA PPMES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-29ERF family protein