PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019194149.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

HB-other

Protein Properties

Length: 1729aa MW: 194352 Da PI: 5.3173

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019194149.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.5	1.1e-18	49	103	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+ ++k+ yps++ r+eL+ klgLt+rq ++WF+ rR k++k XP_019194149.1 49 KRKMKTASQLEILEKTYAKEAYPSEAVRAELSVKLGLTDRQLQMWFCHRRLKDRK 103 89999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1729 aa Download sequence
MEPGGGNGGS VGGGESAEPA GVAGGSAGGS GGSDVEKKKP PEGGEPKVKR KMKTASQLEI 60 LEKTYAKEAY PSEAVRAELS VKLGLTDRQL QMWFCHRRLK DRKAPSVPSV KRARKEDLPA 120 AMVSSCGHDD IATGGELRSG HASASASGLN PHTPVDLQQH HPRVVHRPGT AVPRYAAEMP 180 AMKRYYEPPQ AISELRAIAF VEAQLGEPLR EDGPILGMEF DPLPPGAFGA PIVTAVHHKP 240 AERSFDTELY ERQDSRQIKG PTRTLLEYQF IPEQPSIRSD AYERSVPHHY YSSPSEAQGS 300 RPSLSSGRSY LHNSEHFPSG YSIQTQPPTL SLLHQQGRHA HLSPASEEVD VAPQGSSHGK 360 ISVEGNFGSH PITGLENQFV SSETRVIHEE ERLERKRKSE EAKMAREVEA HEKRIRKELE 420 KQDMLRRKRE EQMRKEMERQ DRERRKEEER LLREKQREEE RCLREQRREM ERREKFLQKE 480 SKRVEKMKLK EEMRREKEAA KLKAANERAA ARRIAKESIE LIEDERLELM ELAASTKGLP 540 SVLALDNEAL QNLESFADML REFPPKFVFL KKPFGIQPWI GSDANVGNLL MVWRFLITFS 600 DVLSLWPFTL DELVQAFHDY DPRLLGEIHI ALLRSIIKDI EDVARTSSAV VGANQNNAAN 660 PGGGHPQIVE GAYAWGFDIR SWQRHLNPLT WPEILRQFAL SAGFGPKLTK RNIEPACLRD 720 ENEGNDAADI ISNLRNGVAA ENALSKMQER GLSNPRRSRH CLTPGTVKFA AFHVLSFEGS 780 KGLTILDVAE RIQASGLRDL TTSKTPEASI AAALSRDTKL FERTAPSTYC VRTPYRKDPA 840 DAEALLAAAR EKVHLFKNRC LNGEEADDGE KEEDSESDAA EDPEVDNLED ETNISKSSGS 900 CKPSRLEDHK ISYDLAEMPP GSVQISPTLM GEKKTSGDQL VDTGSQCESS IPDQENTIVD 960 DGSAGEQWVQ GLMDGEYSDL SVEERLDALV ALVGFANEGN SIRFALEERL EAASALKKQM 1020 WAEAQLDKRR FKDDYVIKMQ FSSVINANNA AQPGDSNNPG NDPNYSSNVI VERNLPLQEF 1080 SAGPDNIQVQ HLGYVAEKSR MQLKTYIGYR AEQTYVYRSL PLGQDRRRNR YWQFITSSRN 1140 DPGYGRIFVE LRDGQWRLID SEKGFDALLA SLDVRGIRES HLHLMLQRIE VTFKETARRN 1200 MLQMMNSVAD VENDVKKEAL EKTSTLDKDP NSPPCISSFM IGVGRNIVEK SDALRRYVDF 1260 EKWMWEECLD SKFLCATKEG KIRRRNLLRV CDRCYVLYFE ENHCPFCHTT YAKNLKFSEH 1320 LTRCKEKLKD EYLSPFRALY SSPPIRIRLL KAQLASLEVS VLPEAFEPVW SEEYRSHWGM 1380 KLQTASSAED LLQLLTMLEC AIKRDFLLSN YETSNELLGI GDQPAGFERV GVLPWIPHTT 1440 AALALRLMEL DTSICYTQQQ KEESQKGERN FSALPSKYTI PKNVAEEVPA EALHEAGMWP 1500 NVENGSGSGR GRGRGRGRRR ISIEKSQRKI VDSKPESASH RLGALPGWKG QSKGQGGRRK 1560 GRRSARSRQR PVKNVITINA DNRASSIEQQ WKEEEMETAQ IQIEAAENDS SPERSGFEND 1620 NGQASEDEYD DYAMTEEYPG LFSGKSGQQM EIGGNYDADQ GIDDIDYAND DYIDGDDEEV 1680 EGEEDAPGNE DIEGYFNGDS EDEGNRFRAE EQIESESQDS PSSSSDYSE

Sequence ? help Back to Top

Protein Sequence Length: 1729 aa Download sequence

MEPGGGNGGS VGGGESAEPA GVAGGSAGGS GGSDVEKKKP PEGGEPKVKR KMKTASQLEI  60
LEKTYAKEAY PSEAVRAELS VKLGLTDRQL QMWFCHRRLK DRKAPSVPSV KRARKEDLPA  120
AMVSSCGHDD IATGGELRSG HASASASGLN PHTPVDLQQH HPRVVHRPGT AVPRYAAEMP  180
AMKRYYEPPQ AISELRAIAF VEAQLGEPLR EDGPILGMEF DPLPPGAFGA PIVTAVHHKP  240
AERSFDTELY ERQDSRQIKG PTRTLLEYQF IPEQPSIRSD AYERSVPHHY YSSPSEAQGS  300
RPSLSSGRSY LHNSEHFPSG YSIQTQPPTL SLLHQQGRHA HLSPASEEVD VAPQGSSHGK  360
ISVEGNFGSH PITGLENQFV SSETRVIHEE ERLERKRKSE EAKMAREVEA HEKRIRKELE  420
KQDMLRRKRE EQMRKEMERQ DRERRKEEER LLREKQREEE RCLREQRREM ERREKFLQKE  480
SKRVEKMKLK EEMRREKEAA KLKAANERAA ARRIAKESIE LIEDERLELM ELAASTKGLP  540
SVLALDNEAL QNLESFADML REFPPKFVFL KKPFGIQPWI GSDANVGNLL MVWRFLITFS  600
DVLSLWPFTL DELVQAFHDY DPRLLGEIHI ALLRSIIKDI EDVARTSSAV VGANQNNAAN  660
PGGGHPQIVE GAYAWGFDIR SWQRHLNPLT WPEILRQFAL SAGFGPKLTK RNIEPACLRD  720
ENEGNDAADI ISNLRNGVAA ENALSKMQER GLSNPRRSRH CLTPGTVKFA AFHVLSFEGS  780
KGLTILDVAE RIQASGLRDL TTSKTPEASI AAALSRDTKL FERTAPSTYC VRTPYRKDPA  840
DAEALLAAAR EKVHLFKNRC LNGEEADDGE KEEDSESDAA EDPEVDNLED ETNISKSSGS  900
CKPSRLEDHK ISYDLAEMPP GSVQISPTLM GEKKTSGDQL VDTGSQCESS IPDQENTIVD  960
DGSAGEQWVQ GLMDGEYSDL SVEERLDALV ALVGFANEGN SIRFALEERL EAASALKKQM  1020
WAEAQLDKRR FKDDYVIKMQ FSSVINANNA AQPGDSNNPG NDPNYSSNVI VERNLPLQEF  1080
SAGPDNIQVQ HLGYVAEKSR MQLKTYIGYR AEQTYVYRSL PLGQDRRRNR YWQFITSSRN  1140
DPGYGRIFVE LRDGQWRLID SEKGFDALLA SLDVRGIRES HLHLMLQRIE VTFKETARRN  1200
MLQMMNSVAD VENDVKKEAL EKTSTLDKDP NSPPCISSFM IGVGRNIVEK SDALRRYVDF  1260
EKWMWEECLD SKFLCATKEG KIRRRNLLRV CDRCYVLYFE ENHCPFCHTT YAKNLKFSEH  1320
LTRCKEKLKD EYLSPFRALY SSPPIRIRLL KAQLASLEVS VLPEAFEPVW SEEYRSHWGM  1380
KLQTASSAED LLQLLTMLEC AIKRDFLLSN YETSNELLGI GDQPAGFERV GVLPWIPHTT  1440
AALALRLMEL DTSICYTQQQ KEESQKGERN FSALPSKYTI PKNVAEEVPA EALHEAGMWP  1500
NVENGSGSGR GRGRGRGRRR ISIEKSQRKI VDSKPESASH RLGALPGWKG QSKGQGGRRK  1560
GRRSARSRQR PVKNVITINA DNRASSIEQQ WKEEEMETAQ IQIEAAENDS SPERSGFEND  1620
NGQASEDEYD DYAMTEEYPG LFSGKSGQQM EIGGNYDADQ GIDDIDYAND DYIDGDDEEV  1680
EGEEDAPGNE DIEGYFNGDS EDEGNRFRAE EQIESESQDS PSSSSDYSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	38	51	KKPPEGGEPKVKRK
2	1510	1520	RGRGRGRGRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein