PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194413.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 387aa    MW: 42634.9 Da    PI: 4.5645
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194413.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18122171255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+G+r+++ +g+W+AeIrdp+    +  r++lg+f taeeAa+a++  +++++g
  XP_019194413.1 122 QYRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTFNTAEEAARAYDVEARRIRG 171
                     69*******.**********75....44************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MCGGAIISDI IPPSRSSRRL TADLLWGPAD LSSNNGGKKK NRNSNSSGSF YSRPSRSGIT  60
DIDNDFEADF QHFKDYSDVE VEEVDAKPFD FSASKQPGFS SGSNSDLTKD ADKSSKRKRK  120
NQYRGIRQRP WGKWAAEIRD PVKGVRVWLG TFNTAEEAAR AYDVEARRIR GKKAKVNFPD  180
EAPISGCNVK PNARKVLQKE SSQPDMSFTN MLENVYYEPL NSLDEKPLTK QNEIIDAYAA  240
PGDMSHTSYA PSDTANLFFN SEEGSNSFGC SELGWGDLSS RTPEISSVLS AAVEADEALF  300
AEEANQAKKL KSSSENLVAS DGNTVNKLSD ELSAFEAEMK LFQIPYLEGN WEASIDTFLN  360
GDATQDGGNA MDLWSFDYAP TLMGNEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.36e-51ERF family protein