PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194466.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 222aa    MW: 24460.6 Da    PI: 9.5701
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.6e-214898155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr ++ +gr++AeIrd ++    ++r++lg+f+taeeAa+a++aa+++++g
  XP_019194466.1 48 TRYRGVRKRP-WGRYAAEIRDpFK----KTRVWLGTFDTAEEAARAYDAAAREFRG 98
                    68********.**********662....5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MGNQRYTWFC LYINSAISLS VLQRRKGRVF RMPARDRSNA ANDGGRETRY RGVRKRPWGR  60
YAAEIRDPFK KTRVWLGTFD TAEEAARAYD AAAREFRGTR AKTNFPAVST SAFCPSLSST  120
VESAGSGPSI LPAAPPTPPL SLFHLPCVFP VPRPLYYYDP RGQAGALNHR LDILRLYPPA  180
SSSVQSDSDS SSVVDFDCSE PSSLGKAVDL DLNLPPPAEL SD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.14e-24ERF family protein