PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194467.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 211aa    MW: 23404.5 Da    PI: 10.1958
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.2e-214898155
             AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++y+GVr ++ +gr++AeIrd ++    ++r++lg+f+taeeAa+a++aa+++++g
  XP_019194467.1 48 TRYRGVRKRP-WGRYAAEIRDpFK----KTRVWLGTFDTAEEAARAYDAAAREFRG 98
                    68********.**********662....5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MGNQRYTWFC LYINSAISLS VLQRRKGRVF RMPARDRSNA ANDGGRETRY RGVRKRPWGR  60
YAAEIRDPFK KTRVWLGTFD TAEEAARAYD AAAREFRGTR AKTNFPAVST SAFCPSLSST  120
VESAGSGPSI LPAAPPTPPL SLFHLPCVFP VPRPLYYYDP RGQAGALNHR LDILRLYPPA  180
SSSVQSDSDS SSVVDFDLNS FFLSLLCQGG L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.14e-23ERF family protein