PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194728.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 240aa    MW: 25685.5 Da    PI: 4.7538
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38.2e-1881130155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y+GVr  +++g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++l+ 
  XP_019194728.1  81 PKYRGVR--SRSGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALRS 130
                     79****6..668*********843...5***********************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MADPNSKIPE IISQTASYPS RQLQVIAATA TTVTAAAVGE DKVTETTTTT LDIENLLSPR  60
LAEQGQAAAA SSPTGGRGKH PKYRGVRSRS GKWVSEIREP RKTTRIWLGT YPTPEMAAAA  120
YDVAALALRS AEAVLNFPAY AARYPVPVSS EAADIRRAAA SAAAMMKPES SSGDGGGSRQ  180
ERKDDPSVNT EYIDEEELFD MHNLLVDMAG GMMVSPPRIN SSHPADDSPE NSDAETLWNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-38ERF family protein