PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194785.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 342aa    MW: 37035.3 Da    PI: 6.9359
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.25.4e-31182240259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC ++k+ver+++dp+++++tY+ eHnh+
  XP_019194785.1 182 SDVWSWRKYGQKPIKGSPYPRGYYRCSTSkGCLARKQVERNRSDPTMFIVTYTAEHNHP 240
                     79************************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MGDDWDLHAV VRGCSAAAAA AAASSSAATA TTAASPLFQP RQDQDLLCLQ DLLEFGAARN  60
ENRRRFNDDL HDLYRPFFPP PPPPQPSLQR TQPPPPPLSP QSTPISPLSV LGGLPDLSPS  120
HQILKPHISP AATIIHPKKQ PFPVNISSAT SPATPNTQSP RSKRRKNQLK RVCQVPAEAL  180
SSDVWSWRKY GQKPIKGSPY PRGYYRCSTS KGCLARKQVE RNRSDPTMFI VTYTAEHNHP  240
MPTHRNSLAG STRQKPAAAS SGDTMKSGAS PAPEKQESSR DDMFEDEDDE FGVSNMAIDS  300
MGPDDDFFEG LEDLGGDCFP DNLPGQLPWL TNNATTTAAG GG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-67WRKY family protein