PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019194986.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family bHLH
Protein Properties Length: 213aa    MW: 24201.8 Da    PI: 5.4154
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019194986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.68.3e-174493255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+e+E+rRR++iN++f+ Lr l+P+     + K +Ka+ L ++++YI+sLq
  XP_019194986.1 44 RSKHSEAEQRRRSKINERFQILRNLIPEK----DNKRDKASFLLEVIQYIQSLQ 93
                    889*************************8....799*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MLRAAMNHSD EDDDMEFSSR SVDGFSQKVK VEGRSGDQKA NVVRSKHSEA EQRRRSKINE  60
RFQILRNLIP EKDNKRDKAS FLLEVIQYIQ SLQGRIQMYE GGCQDWSQEP SELMPWRSSS  120
GAVGHSELIR NGSAHEDNGV LDQTILANAH DSTESDPSAE VLYKTMDDLQ RLTNEATSFG  180
MQMQPSFFEV RMVKKSQKLE AEKLESQTSS PRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.12e-35bHLH family protein