PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_019195085.1

Organism

Ipomoea nil

Taxonomic ID

35883

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea

Family

FAR1

Protein Properties

Length: 777aa MW: 88668.9 Da PI: 7.9702

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_019195085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	26.4	2.3e-08	680	729	45	90
FAR1 45 kkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +k+ t++++r+++++++gC a+++ k+ + g++ev+ +e+ H+H l+ XP_019195085.1 680 EKSaiggTNERKRRNTSNKVGCLARIVFKLGSAGRYEVKAFEERHTHCLC 729 44456667899999*********************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 777 aa Download sequence
MDGYPYTWEK GSGTEDWLEE RLDRVVAMAD WRGMIEEARV TNILMCTSDH SALFLGLADL 60 RRRGGGGRNG FRFEMAWLLD TGCYGVVEEA WSDGDGDGLM GSLELCKQRL HAWGGDRFHL 120 FGKQIKLLQA KLMGLRGSTD PLSLEEYRAI ETQLSQLEAQ EDVYWRQRIE GIKWGWVDKG 180 AMNAVIIDYF DKIFKSGNPP VNDDWFEMIL PRVFDCQNDS LLKPFVADEK VHEFATDLRP 240 IALCNVVYRI MEKMIANRMK PLLDNIISES HSAFIPDRLI TDNILVASEI GHFLNIKQCD 300 RWVELIMLCL TTVSYNVLVN GSVGGVVTPT RGLRQGDHLS PYLFIICAEA NSQEAGVIKQ 360 CLTKYEQLSG QIINFYKSSV CFSKNTGKGD MDDVVVVLGV VQANDFGKYL GLPSFVGRNK 420 KHVFSYIEEK ITQRIGSWNK KLLSRAGKEI LLKTVAQSMP TFSMSVFLLT DSICMDIQRV 480 MNMYYWAKSG ANNRGIHWMA WDRLCKPKTA GGLGFKDLSA FNLAMLGKQT WHFFTNPESL 540 AVRVYKARYY PKTSYASVRN NPSFCWRSIM ATHDLICNGL RIRVGDGQST LIWEHPWLLN 600 GDSKIQTIMP PELHGSKVSG LIDQDTQSWD LDILRDVLVA DDVNRILRVS VCPAYEDTWY 660 WYREPNGIYS VKSGYRNIIE KSAIGGTNER KRRNTSNKVG CLARIVFKLG SAGRYEVKAF 720 EERHTHCLCE DSYKHFMEVN RRLDIGHQQF ISNYAKVNIG EVRVLTYMRR WLGESIM

Sequence ? help Back to Top

Protein Sequence Length: 777 aa Download sequence

MDGYPYTWEK GSGTEDWLEE RLDRVVAMAD WRGMIEEARV TNILMCTSDH SALFLGLADL  60
RRRGGGGRNG FRFEMAWLLD TGCYGVVEEA WSDGDGDGLM GSLELCKQRL HAWGGDRFHL  120
FGKQIKLLQA KLMGLRGSTD PLSLEEYRAI ETQLSQLEAQ EDVYWRQRIE GIKWGWVDKG  180
AMNAVIIDYF DKIFKSGNPP VNDDWFEMIL PRVFDCQNDS LLKPFVADEK VHEFATDLRP  240
IALCNVVYRI MEKMIANRMK PLLDNIISES HSAFIPDRLI TDNILVASEI GHFLNIKQCD  300
RWVELIMLCL TTVSYNVLVN GSVGGVVTPT RGLRQGDHLS PYLFIICAEA NSQEAGVIKQ  360
CLTKYEQLSG QIINFYKSSV CFSKNTGKGD MDDVVVVLGV VQANDFGKYL GLPSFVGRNK  420
KHVFSYIEEK ITQRIGSWNK KLLSRAGKEI LLKTVAQSMP TFSMSVFLLT DSICMDIQRV  480
MNMYYWAKSG ANNRGIHWMA WDRLCKPKTA GGLGFKDLSA FNLAMLGKQT WHFFTNPESL  540
AVRVYKARYY PKTSYASVRN NPSFCWRSIM ATHDLICNGL RIRVGDGQST LIWEHPWLLN  600
GDSKIQTIMP PELHGSKVSG LIDQDTQSWD LDILRDVLVA DDVNRILRVS VCPAYEDTWY  660
WYREPNGIYS VKSGYRNIIE KSAIGGTNER KRRNTSNKVG CLARIVFKLG SAGRYEVKAF  720
EERHTHCLCE DSYKHFMEVN RRLDIGHQQF ISNYAKVNIG EVRVLTYMRR WLGESIM