PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195223.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family ERF
Protein Properties Length: 261aa    MW: 28594 Da    PI: 5.4321
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195223.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.8e-2082132155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +++Wv+eIr+p++   +kr++lg++ t+e+Aa+a++ a+++l+g
  XP_019195223.1  82 PVYRGVRRRN-NNKWVCEIREPTK---QKRIWLGTYPTPEMAARAHDVAALALRG 132
                     68*****887.8*********964...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDYSTSNSDP NFCGGYGFPQ GEGWSGSRAS HSYPNFCGGY GFPQGEGWSG GRASHSDEEV  60
ILAESRPKKR AGRKKFKETR HPVYRGVRRR NNNKWVCEIR EPTKQKRIWL GTYPTPEMAA  120
RAHDVAALAL RGQFAATLNF ADSVWRLPVP ASVDAKDLRK AAVEAAEAFR PKECEEEIVI  180
TTPTSVEAPP PPPADDPWNV LSLSPPIMEP DGFLTGMQGG FLGSMADGNL LSPAPSLGKG  240
FSWDEVEVES DVEVSLWSYS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12610.11e-48ERF family protein