PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195396.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 265aa    MW: 30189.6 Da    PI: 8.7895
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.42.2e-121198197
                    EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                    ffkvl ++d +   +l+lp  f++++g+    +   +l  esg+sW+vk+  +  +++  +t+GW eF+k+ +L+  Df+vF +++ s f  +v v+
  XP_019195396.1 11 FFKVL-NEDFS--TLLRLPLLFTANYGKH--LPEYPVLAIESGESWRVKI--EEADEHQCFTQGWPEFAKDLRLELHDFLVFWFKSPSMF--LVEVY 98
                    77888.33333..359*******999744..666678888**********..******************************98765665..66665 PP
2B3482.3e-151552361090
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                     +++++rl++p  f++e g    + + ++l+d+ g +W v ++   + +++r  +tkGWkeF  an+L +gD++ F+++ +  ++
  XP_019195396.1 155 YSNKSRLRIPTGFMRETGRM--GCMCVVLKDPMGIEWPVLISRhgKSHKDRSDMTKGWKEFKAANDLVDGDVCRFTHTTEtPGG 236
                     456789**********9744..7899***************776766667799***********************98664554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MASPPERRPS FFKVLNEDFS TLLRLPLLFT ANYGKHLPEY PVLAIESGES WRVKIEEADE  60
HQCFTQGWPE FAKDLRLELH DFLVFWFKSP SMFLVEVYGK TGPAKTLNPL LKGKVSPKIE  120
RDDVSTDAAA AASDDGGVTE KKRKSRPCFS VDMKYSNKSR LRIPTGFMRE TGRMGCMCVV  180
LKDPMGIEWP VLISRHGKSH KDRSDMTKGW KEFKAANDLV DGDVCRFTHT TETPGGSWVL  240
QVQVERLDTT RTDPKPCGRP KREQY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.16e-11B3 family protein