PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195397.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family B3
Protein Properties Length: 133aa    MW: 14802.2 Da    PI: 10.4061
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.93.2e-1745127995
                     HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   9 dvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ++ + +rl++p  fa++h   +++  ++ +l+l +  grsW  k+  ++++++  +  GWk Fv +n+Lk+gD+++++ ++ ++ + ++ 
  XP_019195397.1  45 YYVS-SRLTIPLAFAKKHflgQLS--NNNDLVLVS-GGRSWPAKC--TRSGDSARIN-GWKAFVVDNKLKVGDVCILEIMKGKKLSVNII 127
                     3333.46***********975444..445677666.9********..9999999898.********************877566654444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MTPKMSTGEK QRLVKTKTEM GSSAYERAKA FESKNPFHIS VMYPYYVSSR LTIPLAFAKK  60
HFLGQLSNNN DLVLVSGGRS WPAKCTRSGD SARINGWKAF VVDNKLKVGD VCILEIMKGK  120
KLSVNIIVFP ADD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.14e-13B3 family protein