PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_019195447.1
Organism
Ipomoea nil
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Convolvulaceae; Ipomoeeae; Ipomoea
Family WRKY
Protein Properties Length: 479aa    MW: 52684.8 Da    PI: 6.8921
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_019195447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.78.8e-32220276259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +DgynWrKYGqK+vkgs++prsYYrCt+ +Cpvkkkvers   ++++eitY+g+Hnhe
  XP_019195447.1 220 RDGYNWRKYGQKVVKGSDCPRSYYRCTHLKCPVKKKVERSV-GGHITEITYKGQHNHE 276
                     7****************************************.***************7 PP
2WRKY105.62.5e-33392450159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK+vkg+ +prsYYrCt++gC+v+k+ver+++dpk+v++tYeg+Hnh+
  XP_019195447.1 392 LDDGYKWRKYGQKVVKGNANPRSYYRCTYSGCSVRKHVERASTDPKAVITTYEGKHNHD 450
                     59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 479 aa     Download sequence    
MSEIRERGST IAGPSRPTTL AIAPRPPLES FFNDGFIPGF SPGPMTLVSS FFADSDACSF  60
SQLLAGAMAS PLAKPCLLED SSSKKGSEKQ SGYKQNRPVS LAAAALSPLL VVPPGLSPSG  120
LLNSPGFLSP IQSPFGMSHQ QALAHVTAQA AINQSYRQMQ TEYQQQSSPG DAFEHDLMPN  180
DSFQLQVYDM LDPESLKSEP VEVSQSLRKP APGALERPAR DGYNWRKYGQ KVVKGSDCPR  240
SYYRCTHLKC PVKKKVERSV GGHITEITYK GQHNHELPNP NKRRKDECDL DGGENIQVNS  300
EIASHSWTEM NTSNEAEFSE SAQFSTKLPS EQVDVGCDLD DMEETAMALD EDDVQNPKKR  360
SSEVVSSAMP SSLKTVTESR IIVQTRSDVD LLDDGYKWRK YGQKVVKGNA NPRSYYRCTY  420
SGCSVRKHVE RASTDPKAVI TTYEGKHNHD IPNGRNSNRS QTNANVLQLK QESTLAVNS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.11e-89WRKY family protein